Measured Parameter
in minute slices (for contour curtain images) Center viewpoint over data
Platforms
Animation
Terrain



0

Metadata: loading...

Loaded on 2019-01-07 18:01:13 GMT in 202.2 minutes — View log file
Check/Uncheck Activities (leave this section open for selections to apply - collapse it otherwise)
All

2016-07-25_Tethys_SeaTrial_118 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160725_20160725/20160725T172147/201607251721_201607251830.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T14:40:23

2016-07-25_Tethys_SeaTrial_118 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160725_20160725/20160725T183005/201607251830_201607251903.nc4. 1 underwater segments over 22.7 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T14:41:30

2016-07-26_Tethys_SeaTrial_119 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160726_20160727/20160726T184004/201607261840_201607261844.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T14:42:20

2016-07-26_Tethys_SeaTrial_119 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160726_20160727/20160726T184434/201607261844_201607262108.nc4. 13 underwater segments over 135.0 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T14:44:18

2016-07-26_Tethys_SeaTrial_119 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160726_20160727/20160726T211004/201607262110_201607271548.nc4. 45 underwater segments over 1105.8 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T14:53:00

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160801T165547/201608011655_201608031619.nc4. 75 underwater segments over 2671.3 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:15:06

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160803T161957/201608031619_201608041542.nc4. 27 underwater segments over 1214.9 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:27:13

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160804T154215/201608041542_201608042236.nc4. 16 underwater segments over 406.4 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:31:13

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160804T223610/201608042236_201608050943.nc4. 10 underwater segments over 634.9 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:36:40

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160805T094325/201608050943_201608060855.nc4. 25 underwater segments over 1219.5 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:48:15

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160806T090053/201608060901_201608060923.nc4. 1 underwater segments over 1.6 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:49:35

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160806T092802/201608060928_201608060943.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:50:39

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160806T094819/201608060948_201608061000.nc4. 3 underwater segments over 9.5 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T15:51:35

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160806T100110/201608061001_201608071133.nc4. 34 underwater segments over 1257.8 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:04:29

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160807T113826/201608071138_201608071202.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:05:39

2016-08-01_Tethys_S-LakeMichigan_121 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160801_20160809/20160809T121017/201608091210_201608091437.nc4. 11 underwater segments over 132.2 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:07:21

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160810T151621/201608101516_201608121335.nc4. 65 underwater segments over 2613.8 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:29:07

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160812T133529/201608121335_201608121922.nc4. 6 underwater segments over 340.4 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:32:50

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160812T192745/201608121927_201608121947.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:33:35

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160812T194912/201608121949_201608141447.nc4. 44 underwater segments over 2432.5 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:53:44

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160814T145230/201608141452_201608150112.nc4. 14 underwater segments over 600.0 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T16:59:04

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T011240/201608150112_201608150416.nc4. 4 underwater segments over 38.3 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:01:10

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T041631/201608150416_201608150710.nc4. 1 underwater segments over 17.7 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:03:04

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T071417/201608150714_201608150725.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:03:48

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T072647/201608150726_201608151110.nc4. 4 underwater segments over 23.6 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:05:57

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T111436/201608151114_201608151143.nc4. 1 underwater segments over 1.3 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:06:49

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T114505/201608151145_201608170326.nc4. 41 underwater segments over 2003.1 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:25:44

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160817T032613/201608170326_201608172343.nc4. 27 underwater segments over 1095.0 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:35:42

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160817T234306/201608172343_201608191656.nc4. 61 underwater segments over 2462.8 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:54:36

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160819T165637/201608191656_201608191932.nc4. 4 underwater segments over 137.7 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:56:39

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160820T062028/201608200620_201608200635.nc4

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T17:57:20

2016-08-10_Tethys_N-LakeMichigan_122 - LRAUV interpolated data

Observational oceanographic data translated with modification from original data file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160820T063635/201608200636_201608201352.nc4. 20 underwater segments over 413.9 minutes nudged toward GPS fixes.

(No comment in NetCDF file)

Loaded into STOQS:
2019-01-07T18:01:00

Parameter-Parameter

Linear regression Free range Samples No stride

                                    
Rotate: Left mouse
Translate: Ctrl + left mouse
Zoom: Alt + left mouse
0

                                    
mp-parquet  Apache Parquet binary column format
Collect: standard_name(s) name(s)
Include: Activity names
Estimated Available
RAM (GB) ... ...
Time (min) ... ...
Rows ...
File size (MB) ...
 
 
Click "Estimate requirements" button before using this Data Access URL
https://stoqs.mbari.org/stoqs_michigan2016/api/measuredparameter.parquet?collect=standard_name

In addition to using the above ad hoc .parquet request generation capability you may also script up requests by activity__name, inherently reducing server-side memory and time requirements. Here is an example of reading Dorado data survey-by-survey into a Matlab session:
% File: read_parquet.m
% Read parquet files from STOQS and report the time it takes
campaign_url = "https://stoqs.mbari.org/stoqs_all_dorado";
api_call = "/api/measuredparameter.parquet?collect=name&activity__name__contains=";
surveys = ["Dorado389_2020_006_06_006_06_decim", "Dorado389_2020_035_00_035_00_decim"];
wo = weboptions('CertificateFilename', '', 'Timeout', 300);
for i=1:length(surveys),
    tic;
    disp(strcat("Reading ", surveys(i), " as .parquet"));
    parquet_url = strcat(campaign_url, api_call, surveys(i));
    file = websave(strcat(surveys(i), '.parquet'), parquet_url, wo);
    disp(strcat("Wrote ", file));
    toc;
    tic;
    info = parquetinfo(file);
    T = parquetread(file);
    disp(strcat("Read ", file));
    toc;
end
disp(info.VariableNames)

—————————————————

>> read_parquet
Reading Dorado389_2020_006_06_006_06_decim as .parquet
Wrote /u/mccann/matlab/Dorado389_2020_006_06_006_06_decim.parquet
Elapsed time is 14.278701 seconds.
Read /u/mccann/matlab/Dorado389_2020_006_06_006_06_decim.parquet
Elapsed time is 0.410685 seconds.
Reading Dorado389_2020_035_00_035_00_decim as .parquet
Wrote /u/mccann/matlab/Dorado389_2020_035_00_035_00_decim.parquet
Elapsed time is 14.070438 seconds.
Read /u/mccann/matlab/Dorado389_2020_035_00_035_00_decim.parquet
Elapsed time is 0.097718 seconds.
    Columns 1 through 11

    "adinos"    "altitude"    "bbp420 (m-1)"    "bbp700 (m-1)"    "bg_biolum (ph L^..."    "biolume"    "diatoms"    "fl700_uncorr"    "fluo"    "hdinos"    "intflash (ph s^{..."

    Columns 12 through 19

    "mepCountList (co..."    "nbflash_high (L^..."    "nbflash_low (L^{..."    "nitrate (micromo..."    "oxygen (ml/l)"    "pitch (degree)"    "profile"    "roll (degree)"

    Columns 20 through 30

    "salinity"    "sepCountList (co..."    "sigmat"    "spice"    "temperature (Cel..."    "yaw (degree)"    "platform"    "timevalue"    "depth"    "latitude"    "longitude"
                                                    
Here is visualize_parquet.ipynb which shows how to read and visualize parquet data in Python.
Here is parquet2csv.py which you can execute at the command line to convert parquet data to a comma separated value file.
mp-kml  Keyhole Markup Language - click on icon to view in Google Earth
Select a single measured parameter for data access to view your selection in Google Earth
KML colormap

                                    
                                
mp-sql  Structured Query Language for PostgreSQL

                                        
                                    
                                
mp-matlab  Matlab - Load data into Matlab structure array
Install this m-file on your system (instructions are in the comments):
https://raw.githubusercontent.com/stoqs/stoqs/master/stoqs/contrib/analysis/dbconn_jdbc_stoqs.m

Then use the 'SQL' in the adjacent tab to load data into Matlab.
mp-json  JavaScript Object Notation
https://stoqs.mbari.org/stoqs_michigan2016/api/measuredparameter.json
mp-csv  Comma Separated Values
https://stoqs.mbari.org/stoqs_michigan2016/api/measuredparameter.csv
mp-tsv  Tabbed Separated Values
https://stoqs.mbari.org/stoqs_michigan2016/api/measuredparameter.tsv
mp-html  Hyper Text Markup Language table
https://stoqs.mbari.org/stoqs_michigan2016/api/measuredparameter.html

Temporal

Click and drag to zoom
Jul 27
Jul 29
Jul 31
Aug 2
Aug 4
Aug 6
Aug 8
Aug 10
Aug 12
Aug 14
Aug 16
Aug 18
Aug 20
-20
0
20
40
60
80
100
Time (gmt)
Depth (m)
   
Click and drag to zoom
 
Color by: Platform Activity

Measured Parameters

Plot Data Filter & Select for data access
Lines Color
  Clear Selection
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|

Parameter Values

Show distribution of parameter values
Histogram display:

Platforms